Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911575.1_cds_XP_016461568.1_54875
CDS Infomation

[gene=LOC107784890] [db_xref=GeneID:107784890] [protein=transcription factor bHLH87-like] [protein_id=XP_016461568.1] [location=complement(join(40776..41335,42584..43361))] [gbkey=CDS]
Sequence

ATGGATACTCTGGATTGCGATGCGACGCCAATCATCAGAAGCGCGTCTTCTTCATGGAAA
AATCAGCAACAGCAAATGATCAAGGACAGCTTAATGATGTGCAGTTTTGCCCCGGTCAGT
AGCAAAGCTAATGTTTTCACTCCAATTCAGCAGCAATGTCATGATTTTGGTGATTCAAAC
GCGCCATCGGCCATGGTTCTTCAGGAATTTGGAGCTGCATTTGATCCAATACACGTCCTT
TCTAGTTGGAACATCCCCCAGCGCCAAGAAGCTGCGACAAAATTGGCTGCGGATTCTGTC
GCTGGTAAATCAAGAACAGGTCCAAGCAGGGATTGTACTAAAATAGGCCCGTCTTCTTTT
CGTCCACAGAACAATGTTGTGCCTAACTTGGGTGATAGTCTATCGGCAGTTTGTGGCCTA
ATGCCAGATAATCTTGATTGCAATGGCCCAATCACAAAGAGCAGGTCCCTTGATTGCTTG
CTCTCTGCAACCAATACAAGCAATTACACGGACACATCGGTCGAAGATGATGAAATTTCC
ATGATTTTCTCTGATGATTCCAAAAGACTGTGGAATACCAACACTGACAATTTTGCAGTT
TCATCTGGAGAATCTGCAATCGATGCCTTCATCTTGAAACCCATCGATGCCAATGACAGC
AACAATATTGAGTGCCCTGTTAATGAGACGGATCAACACAACAATCCAATAAGATCTTCG
GAAGCAAAGCGTCACATGACCAAGAGAAGAAGATACAATCGTGCTCTGCTCCAACCAGAT
TTGTCAACCAAAGACTCAGGTTTCAAGCTCATATCGGAAGACAAACCCAAGTCCAAGAAA
CTAAGATCAGAAAATACGAACATCAATTTCCAGCAATCTAGCTCGTCAGCATCTTCAGCA
GATGACGAGCCTGATTCAGAAGCAATTACGCAAATGAAGGAAATGATTTATTGCGCAGCG
GCATTCAGGCCAATGAGCTTTGGCACAGAAGTAGAAGCGGAAAAGCCCAAGAGAAAGAAC
GTAAGAATATCATCAGATCCACAGACAGTTGCGGCGAGACAAAGGAGGGAAAAGATAAGC
GAAAAAATAAAAATATTGCAGAAGATGGTACCAGGAGGAAGCAAAATGGACACTGCATCT
ATGCTTGATGAGGCTGCAAATTATCTCAAGTTTTTAAGGTCACAAATTCAAGCGATGGAA
GCTTTTGGCCATAAAATAGATCCATTAATTATGACTAACATTAGGTCTTTATCTTCAATA
CCATTCAACTATCCATTTCCCATGCAACCCCATTTTCCCATACAATTAGCTAATCCAGTT
CAGCGTCCCTATAGTTGA

Peptide Sequence

PEP ID

XP_016461568.1
PEP Infomation

PREDICTED: transcription factor bHLH87-like [Nicotiana tabacum]
Sequence

MDTLDCDATPIIRSASSSWKNQQQQMIKDSLMMCSFAPVSSKANVFTPIQQQCHDFGDSN
APSAMVLQEFGAAFDPIHVLSSWNIPQRQEAATKLAADSVAGKSRTGPSRDCTKIGPSSF
RPQNNVVPNLGDSLSAVCGLMPDNLDCNGPITKSRSLDCLLSATNTSNYTDTSVEDDEIS
MIFSDDSKRLWNTNTDNFAVSSGESAIDAFILKPIDANDSNNIECPVNETDQHNNPIRSS
EAKRHMTKRRRYNRALLQPDLSTKDSGFKLISEDKPKSKKLRSENTNINFQQSSSSASSA
DDEPDSEAITQMKEMIYCAAAFRPMSFGTEVEAEKPKRKNVRISSDPQTVAARQRREKIS
EKIKILQKMVPGGSKMDTASMLDEAANYLKFLRSQIQAMEAFGHKIDPLIMTNIRSLSSI
PFNYPFPMQPHFPIQLANPVQRPYS

Transcript Sequence

Gene sequence data has not been registered.